Training course
New York Food Safety Center of Excellence/ Cornell University
Training Opportunities
Freely available webinars and training courses covering topics relevant to genomic epidemiology
200 trainings available
If you'd like to see the full training database, you can find and download the complete Airtable here
Webinar
New York Food Safety Center of Excellence/ Cornell University
Webinar
New York Food Safety Center of Excellence/ Cornell University
Webinar
New York Food Safety Center of Excellence/ Cornell University
Enteric Webinar
New York Food Safety Center of Excellence/ Cornell University
Webinar
Washington Integrated Food Safety Center of Excellence
Webinar
Washington Integrated Food Safety Center of Excellence
Webinar
Washington Integrated Food Safety Center of Excellence
Data Viz Webinar
Washington Integrated Food Safety Center of Excellence
Webinar
Association of Public Health Laboratories
Webinar
Council of State and Territorial Epidemiologists
SARS-CoV-2 Webinar
Council of State and Territorial Epidemiologists
Webinar
Association of Public Health Laboratories
Data Viz Webinar
Association of Public Health Laboratories
Arboviruses Webinar
Association of Public Health Laboratories
Webinar
Association of Public Health Laboratories
Bioinformatics Overview Training course
European Centre for Disease Prevention and Control
Genomic Epi Webinar
Centers for Disease Control and Prevention
Wastewater Training course
European Centre for Disease Prevention and Control
Assembly QC Training course
European Centre for Disease Prevention and Control
Avian Influenza Training course
European Centre for Disease Prevention and Control
AMR Training course
European Centre for Disease Prevention and Control
Training course
European Centre for Disease Prevention and Control
Bioinformatics Overview Training course
European Centre for Disease Prevention and Control
SARS-CoV-2 Bioinformatics Overview Training course
AFRICA CDC PGI TRAINING
Fungal (general) Training course
TEPHINET
Bioinformatics Overview Training webinar
American Society for Microbiology
Bioinformatics Overview Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Bioinformatics Overview Training webinar
American Society for Microbiology
Bioinformatics Overview Training webinar
American Society for Microbiology
Metagenomics Training webinar
American Society for Microbiology
Infection Prevention / Control Training webinar
American Society for Microbiology
Infection Prevention / Control Training webinar
American Society for Microbiology
Data Infrastructure Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Bioinformatics Overview Training webinar
American Society for Microbiology
Bioinformatics Overview Training webinar
American Society for Microbiology
Data Infrastructure Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
AMR Training webinar
American Society for Microbiology
AMR Training webinar
American Society for Microbiology
Data Infrastructure Training webinar
American Society for Microbiology
Bioinformatics Overview Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
QC Training webinar
American Society for Microbiology
QC Training webinar
American Society for Microbiology
QC Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Fungal (general) Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Metagenomics Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Bacterial (general) Training webinar
American Society for Microbiology
Bacterial (general) Training webinar
American Society for Microbiology
Viral (general) Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Bacterial (general) AMR Training webinar
American Society for Microbiology
Bacterial (general) AMR Training webinar
American Society for Microbiology
Bacterial (general) Fungal (general) Training webinar
American Society for Microbiology
Infection Prevention / Control Training webinar
American Society for Microbiology
Viral (general) Training webinar
American Society for Microbiology
Training webinar
American Society for Microbiology
Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Data Viz Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Data Infrastructure Webinar Series
Chan Zuckerberg Initiative
Phylogenetics Webinar Series
Chan Zuckerberg Initiative
Genomic Epi Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Phylogenetics Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Mycobacterium tuberculosis Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Mumps Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
SARS-CoV-2 Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Mpox Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Webinar Series
Chan Zuckerberg Initiative
Genomic Epi Webinar Series
Chan Zuckerberg Initiative
Genomic Epi Webinar Series
WHO / PAHO
Genomic Epi Webinar Series
WHO / PAHO
Genomic Epi Training webinar
Centers for Disease Control and Prevention
Genomic Epi Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
Phylogenetics Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Data Viz Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Data Viz Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Phylogenetics Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Data Viz Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Training webinar
Centers for Disease Control and Prevention
SARS-CoV-2 Genomic Epi Training webinar
Centers for Disease Control and Prevention
Genomic Epi Webinar
PHA4GE
SARS-CoV-2 Webinar
PHA4GE
Webinar
PHA4GE
AMR Webinar
PHA4GE
Metagenomics Webinar
PHA4GE
Bacterial (general) Webinar
PHA4GE
Data Infrastructure Webinar
PHA4GE
Ethics Webinar
PHA4GE
Webinar
PHA4GE
Webinar
PHA4GE
Enteric Webinar
WHO
Infection Prevention / Control Webinar
Labroots
Genomic Epi Webinar Series
Washington State Department of Health
Genomic Epi Webinar Series
Washington State Department of Health
Genomic Epi Webinar Series
Washington State Department of Health
Genomic Epi Bacterial (general) Webinar Series
Washington State Department of Health
Genomic Epi Bacterial (general) Webinar Series
Washington State Department of Health
Genomic Epi Bacterial (general) Webinar Series
Washington State Department of Health
Metagenomics Genomic Epi Bioinformatics Workshop
The National Academies
Genomic Epi Bioinformatics Public Health Application Workshop
The National Academies
Genomic Epi Bioinformatics Public Health Application Wastewater AMR
The National Academies
Genomic Epi Bioinformatics Data Infrastructure Workshop
The National Academies
Data Infrastructure Ethics Workshop
The National Academies
Genomic Epi Bioinformatics Workshop
The National Academies
Genomic Epi Bioinformatics Workshop
The National Academies
Genomic Epi Bioinformatics Workforce Development Funding Program Building
The National Academies
Genomic Epi Bioinformatics Workshop
The National Academies
Genomic Epi Bioinformatics Workshop
The National Academies
SARS-CoV-2 QC Training course
Association of Public Health Laboratories
SARS-CoV-2 Nextstrain Phylogenetics Genomic Epi Training course
Association of Public Health Laboratories
Bioinformatics Ongoing Webinars Page
StaPH-B
Ongoing Webinars Page
Phyloseminar
West Nile Virus Metagenomics Webinar Series
Massachusetts Department of Public Health
West Nile Virus Webinar Series
Massachusetts Department of Public Health
Influenza Webinar Series
Massachusetts Department of Public Health
Influenza Webinar Series
Massachusetts Department of Public Health
Mycobacterium tuberculosis Webinar Series
Massachusetts Department of Public Health
Mycobacterium tuberculosis Webinar Series
Massachusetts Department of Public Health
Bioinformatics Git Webinar Series
Massachusetts Department of Public Health
Bioinformatics Git Webinar Series
Massachusetts Department of Public Health
Webinar Series
Michigan Department of Health and Human Services
Webinar Series
Michigan Department of Health and Human Services
Bioinformatics Overview Webinar Series
Michigan Department of Health and Human Services
Genomic Epi Webinar Series
Michigan Department of Health and Human Services
AMR Data Viz Training course
European Centre for Disease Prevention and Control
Bacterial (general) Cholera Genomic Epi Webinar
European Centre for Disease Prevention and Control
Phylogenetics Webinar Series
European Centre for Disease Prevention and Control
Waterborne Leptospirosis Webinar Series
European Centre for Disease Prevention and Control
Waterborne Webinar Series
European Centre for Disease Prevention and Control
Bordatella pertussis Webinar Series
European Centre for Disease Prevention and Control
RSV Webinar Series
European Centre for Disease Prevention and Control
C. diphtheriae Webinar Series
European Centre for Disease Prevention and Control
Bioinformatics Webinar Series
European Centre for Disease Prevention and Control
Nanopore Webinar Series
European Centre for Disease Prevention and Control
Klebsiella Webinar Series
European Centre for Disease Prevention and Control
Bioinformatics Webinar Series
European Centre for Disease Prevention and Control
Data Viz Webinar Series
European Centre for Disease Prevention and Control
Bioinformatics Training course
Wellcome Connecting Science
Bioinformatics Training course
Wellcome Connecting Science
Eurkaryotes Training course
Wellcome Connecting Science
AMR Training course
Wellcome Connecting Science
Mycobacterium tuberculosis Webinar Series
PHA4GE
Phylogenetics Webinar Series
PHA4GE
Bioinformatics Webinar Series
PHA4GE
Bioinformatics Webinar Series
PHA4GE
Viral (general) Webinar Series
Washington State Department of Health
Viral (general) Webinar Series
Washington State Department of Health
Viral (general) Webinar Series
Washington State Department of Health
Viral (general) Webinar Series
Washington State Department of Health
SARS-CoV-2 Webinar
Council of State and Territorial Epidemiologists
HIV Webinar
Council of State and Territorial Epidemiologists
Data Viz Data Infrastructure Webinar
Council of State and Territorial Epidemiologists
Data Viz Webinar
Council of State and Territorial Epidemiologists
Healthcare Webinar
Council of State and Territorial Epidemiologists
Hantavirus Webinar
Council of State and Territorial Epidemiologists
Data Viz Training course
Physalia Courses
Training course
Pathogen Genomics Centers of Excellence (PGCoE)
Phylogenetics Bioinformatics Overview Public Health Application Training course
Pathogen Genomics Centers of Excellence (PGCoE)
Enteric Data Viz Public Health Application
DTU
AMR Data Viz Training course
DTU
AMR Training course
Fleming Fund
Bacterial (general) Bioinformatics Training course
DTU
SARS-CoV-2 Training course
DTU
Genomic Epi NCBI Training course
Council of State and Territorial Epidemiologists
Enteric Phylogenetics Training course
European Centre for Disease Prevention and Control
Genomic Epi Phylogenetics Training course
European Centre for Disease Prevention and Control
Bacterial (general) Taxonomy Training course
European Centre for Disease Prevention and Control
Genomic Epi Training course
Bioinformatics Canada
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Self-Study Exercises
Hands-on tutorials and exercises for self-paced learning in genomic epidemiology.
Digital Epidemiology Workshop →
Hands on exercise using web-based tools (EpiCollect, Pathogenwatch, Data-flo, Microreact) to conduct a genomic epidemiology investigation.
Centre for Genomic Pathogen Surveillance
Infectious Disease Genomic Epidemiology 2023 →
This 4-day course from CBW provides an introduction to genomic epidemiology analysis followed by hands-on practical tutorials demonstrating the use of selected analysis tools. The tutorials are designed as self-contained units that include example data and detailed instructions.
Bioinformatics.ca
Whole Genome Multi Locus Sequence Typing Activity →
This activity was developed by the New York Integrated Food Safety Center of Excellence to provide public health staff or students with an understanding of how whole genome sequencing (WGS), and particularly whole genome multi locus sequence typing (wgMLST), works as a subtyping method.
New York Food Safety Center of Excellence / Cornell University
Bioinformatics for Genomic Epidemiology March 2024 →
An introductory course on Pathogen Bioinformatics for Genomic Epidemiology. Topics covered include Introduction Unix/Linux, command line, shell scripting, containers, Galaxy, Nextflow, R, and a cholera case study.
SANBI (South African National Bioinformatics Institute)